| Course | Adm Dept | Required | Title | Fall 08 | Spring 09 | Sem |
| BioE 10 | | yes | Introduction to Biomedicine for Engineers | Conboy/Kumar | X | F/Sp |
| BioE 22 | | | Biotechnology | M. Dueck | X | Fall |
| BioE 22L | | | Biotechnology Lab | M.Dueck | X | Fall |
| BioE 24 | | yes | Aspects of BioE | Liepmann/Mofrad | Liepmann | F/Sp |
| BioE 25 | | yes | Careers in Bioenginnering | X | Liepmann | Sp |
| BioE 39 | | | Freshmen/Sophomore Seminars | X | X | F/Sp |
| BioE 84 | | | Sophmore Seminar | X | X | F/Sp |
| BioE 98 | | | Supervised Ind Group Studies | Conboy/Barchus? | Conboy/Barchus? | F/Sp |
| BioE 100 | | Recommended | Ethics | T. Head-Gordon | Budinger | Sp |
| BioE 101 | | Fundamental | Intstrumentation in Biology & Medicine | X | X | Sp |
| BioE 102 | | Fundamental | Biomechanics | Li
| X | F |
| BioE 104 | | Fundamental | Biological Transport Phenomena | X | Johnson | Sp |
| BioE C 105b | ME | Fundamental | Thermodynamics and Biothermodynamics | X | Van Carey (ME) | Fall |
| BioE 110 | | Fundamental | Biomedical Physiology for Engineers | X | Kumar | Sp |
| BioE 112 | | | Molecular Cell Biomechanics | X
| Mofrad
| Fall |
| BioE 115 | | | Cell Biol for Engineers | Li, Johnson | Johnson
| F/Sp |
| BioE 116 | | | Cell & Tissue Engineering | X
| Li
| Sp |
| BioE C117 | ME | | Struct. Aspects of Biomaterials | X | X | Sp |
| BioE C118 | BioE | | Biol. Performance of Materials | Healy | X | F |
| BioE C119 | ME C176 | | Orthopaedic Biomechanics | T. Keaveney | X | F |
| BioE 121 | | | Intro to BioMEMS | L. Lee
| X | Sp |
| BioE 121L | | | BioMems & BioNanotech Lab | X | M. Dueck | F |
| BioE C125 | EECS | | Intro to Robotics | Ruzena Bajcsy | X | F |
| BioE 131 | | Fundamental | Intro to Computational Biology | Holmes | X | F |
| BioE C141 | Statistics | | Biostatistics | X | Huang (Statistics) | Sp |
| BioE 142 | | | Progr for Biol & Genomics | X | X | F |
| BioE 143 | | | Computational Methods in Biology | X | Head-Gordon | Sp |
| BioE 144 | | | Introduction to Protein Informatics | Sjolander | X | Sp |
| BioE C145L | EECS | | Introductory Electronic Transducer Lab | Derenzo | X | F |
| BioE C145M | EECS | | Intro. Microcomputer Interfacing Lab | X | Derenzo | Sp |
| BioE C146 | PMB | | Topics in Genomics & Comp Bio | X | X | Sp |
| BioE 155 | | | Introduction to Bioastronautics | X | X | Sp |
| BioE 164 | | | Optics & Microscopy | Fletcher | X | F |
| BioE C165 | EECS C145B | | Image Processing | Conolly | X | Sp |
| BioE 168L | | | Practical Light Microspy | X | Fletcher | F |
| BioE 191 | | | Junior/Senior Seminar | X | X | F/Sp |
| BioE 196 | | Yes | Undergraduate Design Research | Faculty | Faculty | F/Sp |
| BioE H194 | | yes | Honors Ugrad Research | Faculty | Faculty | F/Sp |
| BioE 198 | | | Directed Group Study for Adv Ugrads | Conboy/Barchus? | Conboy/Barchus? | F/Sp |
| BioE 200 | | | The Graduate Group Introductory Seminar | T. Johnson | Staff | F |
| BioE 200 | | | Department Seminar | Staff | Staff | |
| BioE 210 | | | Cell Mechanics and the Cytoskeleton | X | Fletcher | Sp |
| BioE 211 | | | Cell and Tissue Mechanotransduction | X | X | Sp |
| BioE C212 | ME | | Heat & Mass Trans in Biomed Eng | X | Rubinsky | Sp |
| BioE C213 | ME | | Fluid Mechanics | X | Berger | Sp |
| BioE C214 | ME | | Advance Tissue Mechanics | X | Keaveny | Sp |
| BioE 215 | | | Models of Cell Mechanics: Dynamics of the Cytoskelton & Nucleus | X | X | Sp |
| BioE C216 | Mat Sci | | Macromol Sci in Biotech & Med | X | Healy | Sp |
| BioE C217 | ME | | Biomimetic Engineering-Engineering from Biology | H. Dharan | X | F/Sp |
| BioE C218 | BioE(MCB) | | Stem Cells and Directed Organogenesis | X | Conboy | Sp |
| BioE 221 | | | Introduction to Micro & Nanobiotechnology, Rm share w/121 | L. Lee
| X | Sp |
| BioE C223 | ME | | Polymer Engineering | X | X | F |
| *BioE C 230 | BioE | | Implications & Applications of Synthetic Biology | X | X | |
| BioE 231 | | | Intro to Computational Biology | Holmes | X | F |
| BioE 240 | | | Topics in Computational Biology and Evolution | X | Sjolander | |
| BioE 241 | | | Probalistic Modeling in Computational Biology | X
| X | |
| BioE 243 | | | Computational Methods in Biology | X | Head-Gordon | Sp |
| BioE 244 | | | Introduction to Protein Informatics (rm share w/144) | Sjolander | X | |
| *BioE C246 | PMB | | Topics in Genomics & Comp Bio | X | X | Sp |
| BioE 265 | | | Principles of Magnetic Resonance Imaging | X | Conolly | Sp |
| BioE C279 | BioE | | Occupational Biomechanics | X | Rempel | Sp |
| **BioE C280 | NSE C201 | | Introduction to Nano Science and Engineering | X | S.W. Lee? | |
| BioE C290C | ME & others | | Topics in Fluid Mechanics | X | X | F/Sp |
| BioE 298 | | | Department Seminar | BioE Faculty | BioE Faculty | F/Sp |
| BioE 301 | | | Teaching Techniques for BioE | T. Johnson | X | F/Sp |
| | | | Special Courses-Umbrella | | | |
| BioE 190H | | | Intro to BioNanoscience and BioTechnology | SW Lee | | |
| | | | is up for approval may be BioE 150 | | | |
