Bioengineering News

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Single-cell studies offer new view of how HIV infections persist

August 8, 2022

Professor Iain Clark, in partnership with graduate program faculty member Adam Abate, was able to analyze single cells harboring latent HIV using a technique that isolates single, infected cells as tiny amounts of blood move through their microfluidic devices. Their work was featured in Science news.

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Transfusing blood from an old mouse to a younger mouse causes ageing

August 8, 2022

New research from the Conboy Lab, highlighted in New Scientist magazine, has demonstrated that transfusing young mice with blood from older rodents quickly triggers ageing in the young, suggesting that cellular ageing isn’t just a case of wear and tear. This is one step closer to potential anti-ageing treatments and builds on years of aging research from Professor Irina Conboy.

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Huue Closes a $14.6 Million Series A to Disrupt Denim Dyeing

August 2, 2022

Synthetic biology startup Huue, founded by BioE PhD alumni Tammy Hsu, has raised $14.6 million in a Series A funding round for what it says is the world’s first clean and scalable indigo dye for denim.

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David Schaffer: Research that takes risks must be supported

August 1, 2022

Professor David Schaffer reflects on the reasons why he sees Berkeley as a leader in world-changing research, innovation and entrepreneurship.

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Human lung proteins can advance or thwart SARS-CoV-2 infections

July 28, 2022

A study led by Prof Patrick Hsu has identified specific proteins within our bodies that can promote or protect us from SARS-CoV-2 infections, potentially opening the door to new antiviral therapies. Notably, they showed that mucins — the main component of mucus found in the lungs — seem to help block the SARS-CoV-2 virus from entering cells.

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Bacteria for Blastoff: Using Microbes to Make Supercharged New Rocket Fuel

June 30, 2022

New research led by Professor Jay Keasling took inspiration from an extraordinary antifungal molecule made by Streptomyces bacteria to develop a totally new type of fuel that has projected energy density greater than the most advanced heavy-duty fuels used today, including the rocket fuels used by NASA.

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Streets and Yartsev promoted to Associate Professor

June 30, 2022

Congratulations to new Associate Professors Aaron Streets and Michael Yartsev, granted tenure effective July 1, 2022!

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Head-Gordon Pursuing AI-driven Drug Discovery at New NIH Center

June 30, 2022

Professor Teresa Head-Gordon will continue the machine learning COVID-19 research spurred by a 2020 Digital Transformation Institute grant, with the Midwest Antiviral Drug Discovery Center for Pathogens of Pandemic Concern, one of nine new centers announced by the National Institute of Allergy and Infectious Diseases on May 18, 2022.

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Schaffer named Executive Director of QB3

June 28, 2022

David Schaffer, PhD, a University of California, Berkeley professor of chemical and biomolecular engineering, bioengineering, and molecular and cell biology, who holds over 50 patents and whose research has spawned eight companies to commercialize stem cell and gene therapies, has been appointed the next executive director of QB3.

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Decoding the Human Proteome With Glyphic Biotechnologies

June 23, 2022

Check out this feature on Bakar Labs startup Glyphic Biotechnologies – co-founded by MTM alumnus Josh Yang!

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Messersmith receives Bakar Fellows Spark Award

June 16, 2022

Congratulations to Professor Phillip Messersmith, one of seven new recipients of the 2022 Bakar Fellows Spark Award, designed to accelerate faculty-led research and produce tangible, positive societal impact through commercialization. Messersmith is developing a regenerative therapy for the intestinal ulcers that accompany inflammatory bowel disease.

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Pruitt named 2022 Brown Engineering Alumni Medalist

June 13, 2022

Professor Lisa Pruitt is one of two 2022 recipients of the Brown Engineering Alumni Medal, recognizing exceptional records of accomplishment by Brown alumni in their engineering careers. Pruitt received her Ph.D. from Brown and joined the faculty of Mechanical Engineering at UC Berkeley in 1993, later becoming a joint professor in the Department of Bioengineering.

2022 Commencement

May 26, 2022

Congratulations to all of our graduates! In addition to our many talented grads, we’re proud that both the keynote and student speakers at the 2022 UC Berkeley doctoral commencement ceremony were bioengineers! Sally Winkler, now a research scientist at AbbVie, gave the student address, and Ann Lee-Karlon, BS alumna and COO of Altos Labs, delivered…

flying bat Photo by Yuval Barkai @bats.tlv

Researchers resolve riddle of mammalian brain’s navigation system

May 16, 2022

In a study published in Nature, a team of researchers in the lab of Professor Michael Yartsev studied neural activity in the hippocampus of freely flying bats and found that the neural codes remained unchanged over days and weeks. The discovery that these GPS-like neural codes remain stable over time has upended previous research and may further our understanding of diseases like Alzheimer’s.

Rempel leads study on electric vehicle charging stations

May 10, 2022

A study led by Professor Emeritus David Rempel and the environmental non-profit group Cool the Earth tested the functionality of 657 EVSE (electric vehicle service equipment) connectors at all 181 open public, non-Tesla charging stations in the Bay area. The study found that 27% were nonfunctional, a concerning issue for the widespread adoption of electric vehicles.

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Local news features BioE High School Competition

May 6, 2022

The annual BioEngineering High School Competition, conceived and managed entirely by undergraduates in the Berkeley BioEngineering Honor Society, was featured in the local The Press newspaper, along with the winning high school team.

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Berkeley’s Bakar BioEnginuity Hub opens its doors

May 6, 2022

UC Berkeley this week celebrated the grand opening of the Bakar BioEnginuity Hub (BBH), the campus’s bold new home for research and innovation. BBH owes much of its success to founding Director Amy Herr and current Director David Schaffer, both BioE Professors. Nearly 20 startups have already moved into the space, several led by bioengineering alumni.

Lee Karlon

Berkeley commencement features two BioE speakers

May 6, 2022

Both the keynote and student speakers at the 2022 UC Berkeley doctoral commencement ceremony are bioengineers! Recent PhD alumna Sally Winkler, now a research scientist at AbbVie, will give the student address, and Ann Lee-Karlon, BS alumna and COO of Altos Labs, will deliver the keynote. The ceremony on May 18 will be webcast live.

artists impression of nuclear power on Mars

Solar beats nuclear at many potential settlement sites on Mars

April 27, 2022

Research by BioE PhD student Aaron Berliner and Prof Adam Arkin shows that photovoltaics could provide all the power needed for an extended mission to Mars, or even a permanent settlement there. The authors are members of the Center for the Utilization of Biological Engineering in Space (CUBES), led by Adam Arkin.

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Congratulations new NSF Fellows!

April 21, 2022

Congratulations to FIFTEEN new NSF Graduate Research Fellows! Among the winners are:  current PhD students: Deniz Akpinaroglu, Joana Cabrera, Joy Chen, Benjamin Lesch, Alvince Pongos, Caleb Rux, Gabriel Sturm, and Jazmin Velazquez; incoming PhD students Maple Chen, Russell Ro and Esther Sim; graduating undergrads Joyce Chen and Carolina Rios-Martinez;

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Dan Fletcher to lead the Blum Center

April 21, 2022

Dan Fletcher will be the next director of the The Blum Center for Developing Economies at UC Berkeley. The Blum Center supports research innovation for underserved and low-resource areas in the U.S. and abroad, taking an interdisciplinary approach to developing and supporting the knowledge, technologies, and people to build a more sustainable and equitable world. Fletcher is known for his global perspective and dedication to improving health conditions in low-resource areas, especially through development and refinement of the CellScope, a portable mobile phone-based microscopy platform.

The power of yes for ventilator access

April 18, 2022

BioE undergraduate Athena Lopez is part of a team at the Sutardja Center for Entrepreneurship & Technology working on a startup to address ventilator shortages around the world. Lopez is also a member of the BioEngineering Scholars Program.

drawing of cell stiffness mechanism

Kumar and Schaffer discover how biomaterials regulate stem cell neurogenesis in 3D

April 18, 2022

Engineered biomaterials are increasingly used to expand and differentiate stem cells for technological and therapeutic applications. A major open question in the field is how the mechanical properties of material scaffolds regulate stem cell differentiation, especially in complex 3D geometries like those found in tissue. In a collaborative study published in Science Advances, the labs of Sanjay Kumar and David Schaffer have discovered a 3D-specific molecular mechanism through which mechanical inputs act through the transcription factor Egr1 to determine how efficiently neural stem cells turn into neurons.

Now fully complete, human genome reveals new secrets

March 31, 2022

Nearly 20 years after the sequencing of the human genome, a large team of researchers has finally filled in the remaining few percent of unsequenced DNA, providing the first complete, gapless human genome. First author of many of the suite of papers is Nicolas Altemose, 2021 bioengineering PhD and current postdoc with co-author Professor Aaron Streets.

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Undergraduate Alexandra Potter first author on lung cancer screening paper

March 30, 2022

Undergraduate bioengineering student Alexandra Potter has been a long-term collaborator with Dr. CJ Yang of Harvard University on the effectiveness of lung cancer screening. Today she is first author on a paper published in the British Medical Journal, “Association of computed tomography screening with lung cancer stage shift and survival in the United States.” Potter is also CEO of the American Lung Cancer Screening Initiative.